Pumpkin muffins are one of the simplest ways to enjoy fall flavors without a lot of fuss. They’re warm, soft, and spiced just right. Some lean into cozy classics, while others add creative twists like cream cheese filling, oats, chocolate, or even sourdough discard. Whether you’re baking for breakfast, snacks, or something to share, there’s a version here that fits.
This list includes both healthier options and richer treats, so you can pick what works best for your fall baking plans.
1. Healthy Greek Yogurt Pumpkin Muffins
These muffins stay moist thanks to Greek yogurt, which also adds a bit of protein and tang. Pumpkin spice rounds out the flavor, and the texture is tender without being heavy. They’re a great everyday option that still feels seasonal.
Try these Healthy Greek Yogurt Pumpkin Muffins for a lighter fall bake with cozy flavor.
2. Pumpkin Cream Cheese Swirl Muffins with Streusel
These classic pumpkin muffins have a rich swirl of cream cheese in the center and a buttery cinnamon streusel on top. They’re soft, sweet, and layered with texture in every bite.
Bake a batch of Pumpkin Cream Cheese Swirl Muffins when you want something that feels like bakery-style comfort.
3. Copycat Starbucks Pumpkin Muffins
Inspired by the ones you find in coffee shops, these jumbo muffins are filled with a sweet cream cheese center and finished with crunchy pepitas. They’re bold in spice and flavor, but easy to make at home.
Check out these Copycat Starbucks Pumpkin Muffins for a coffeehouse-style treat.
4. Sourdough Discard Pumpkin Muffins
Sourdough discard gives these muffins a mild tang and soft, moist crumb. The pumpkin flavor blends smoothly with the natural depth of the starter, making these a great option for using leftovers.
Try these Sourdough Discard Pumpkin Muffins for a cozy way to bake with discard.
5. Pumpkin Banana Oat Muffins
Naturally sweetened with ripe banana, these muffins use oat flour for a wholesome texture. They’re hearty and filling but still soft, making them a solid breakfast option.
Make these Pumpkin Banana Oat Muffins for a simple, nourishing start to the day.
6. Keto Pumpkin Muffins with Cream Cheese Core
Made with almond flour, these muffins are low in carbs but still rich in texture. A sugar-free cream cheese center adds a satisfying twist, especially for anyone keeping things keto.
Bake a tray of Keto Pumpkin Muffins with Cream Cheese Core for a low-carb option that doesn’t skip on flavor.
7. Pumpkin Cinnamon Roll Muffins
This recipe brings cinnamon roll vibes to pumpkin muffins. Swirled with cinnamon sugar and topped with icing, they’re sweet, soft, and extra cozy without being too rich.
Try these Pumpkin Cinnamon Roll Muffins when you want something warm and familiar.
8. Pumpkin Apple Crumble Muffins
Juicy apple chunks and a crumbly oat topping give these muffins texture and balance. The pumpkin base is soft and spiced, making them a go-to for crisp fall mornings.
Make these Pumpkin Apple Crumble Muffins for a fruit-filled take on pumpkin baking.
9. Gluten-Free Pumpkin Muffins with Oat Flour
These muffins use oat flour for a soft, hearty bite without any gluten. The spice level is just right, and the texture stays moist without being dense.
Try these Gluten-Free Pumpkin Muffins for a naturally gluten-free option that feels like the real deal.
10. Pumpkin Chocolate Muffins
Pumpkin and chocolate blend together here for a rich, cakey muffin that’s full of cocoa flavor and melty chocolate chips. It’s a good pick for anyone who leans sweet.
Check out these Pumpkin Chocolate Muffins when you want something rich but still grounded in fall.
11. Low-Carb Pumpkin Spice Muffins
These muffins use coconut flour and are free of refined sugar, but still taste sweet and warmly spiced. They’re soft with a slightly nutty flavor that works well with pumpkin.
Make these Low-Carb Pumpkin Spice Muffins for a low-sugar take on a seasonal favorite.
12. Pumpkin Cottage Cheese Muffins
These muffins include cottage cheese in the batter, which makes them extra moist and boosts the protein. The flavor stays mellow, letting the pumpkin and spice come through clearly.
Try these Pumpkin Cottage Cheese Muffins for a simple, satisfying snack or breakfast.
Final Thoughts
Pumpkin muffins come in all kinds of styles—simple, sweet, filled, swirled, or packed with wholesome ingredients. Whether you’re reaching for something rich or keeping it light, there’s a version here that brings out the best of fall.
They’re easy to make, easy to share, and always feel right when the air turns cool. Just pick your favorite twist and get baking.
